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CLC Server Command Line Tools silent install & uninstall

A command line client for the QIAGEN CLC Genomics Server.

Commands for installing CLC Server Command Line Tools without prompts, removing it again and detecting it from deployment tools. A command is shown only when it is certain: from the manifest or the installer technology’s documented default.

Related guide: Silent install switches: MSI, NSIS, Inno Setup · Uninstall a program with the registry or PowerShell

With winget

PowerShell
winget install --id QIAGEN.CLCServerCommandLineTools -e --silent --accept-package-agreements --accept-source-agreements
winget upgrade --id QIAGEN.CLCServerCommandLineTools -e --silent
winget uninstall --id QIAGEN.CLCServerCommandLineTools -e --silent

By installer

64-bit · EXE · All users

Silent installCLCServerCommandLineTools_26_0_6.exe -q -Dinstall4j.suppressUnattendedReboot=true
Uninstall registry key
HKLM\SOFTWARE\Microsoft\Windows\CurrentVersion\Uninstall\0803-8719-3724-8959

PowerShell: download, verify, install

Downloads the official file, checks its SHA256 and installs it silently.

install-clc-server-command-line-tools.ps1
$url = 'https://download.clcbio.com/CLCServerCommandLineTools/26.0.6/CLCServerCommandLineTools_26_0_6.exe'
$sha256 = '60FB47A1AB266DDCD65245D578A0BADF05B3AF49FF4BE643E8BE7F3FB8AE869D'
$file = Join-Path $env:TEMP 'CLCServerCommandLineTools_26_0_6.exe'
Invoke-WebRequest -Uri $url -OutFile $file -UseBasicParsing
if ((Get-FileHash $file -Algorithm SHA256).Hash -ne $sha256) { throw 'SHA256 mismatch' }
Start-Process -FilePath $file -ArgumentList '-q -Dinstall4j.suppressUnattendedReboot=true' -Wait

More from QIAGEN Aarhus A/S

See all
  • CLC Genomics WorkbenchAccess all the tools you need for data analysis with our comprehensive solution. Start shifting your focus from data to discovery and take advantage of NGS workflows, interpretation and visualization.
  • CLC Main WorkbenchDNA, RNA and protein sequence data analysis.
  • CLC Network License ManagerHosts network licenses for QIAGEN CLC applications

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