Nanome: baixar versions anteriors

New Features and Improvements
- 2.6.0:
- Scene Recording & Playback: record scenes (including their annotations) and play them back, including on the web viewer.
- Residue Editor: one built-in tool for both residue mutations and rotamer (side-chain) edits.
- MARA Tools: run MARA cheminformatics tools on a whole entry, a component, or your current selection right from the in-headset sidebar (VR + desktop); results and any molecular outputs come back as new structures without changing what you sent.
- Rich Annotations: add custom text and sound annotations, with URLs supported inside text; annotations carry through scene duplication and playback.
- Ligand Table View Presets: save and switch ligand-table layouts per Project, filter by numeric rating, and toggle a 3D tag per ligand.
- Shared Selection: opt-in sharing of your selection with collaborators in your avatar color; following a user now shows their selection too.
- XR Keyboard v2: real-time dictation and clipboard support in the in-headset keyboard.
- Interactions: halogen-π interactions, ligand↔protein-only filtering, highlighting that networks across users, and show/hide toggles for pinned interaction labels.
- Multi-model & trajectory: load multi-model MAE files, atom-count-aware frame limits, smoother large-trajectory playback, and per-frame surfaces when stepping through frames.
- More new tools: Export to SMILES, TM-align protein–protein alignment, "Set as ligand" designation, direct distance filters, a redesigned color picker, chain-instance coloring, an in-app server switch (private cloud / on-prem), and a Loading Report that flags and auto-resolves fixable load issues.
- Pointer highlight: flash a highlight around your pointer that broadcasts to collaborators so they can see where you're pointing.
- Web App: sequence menu, multi-protein structure alignment, image export, scene-playback controls, .pdbqt loading, touch input for tablets and phones, Org role management, and structures now render visible on load. Viewers can step through models and make selections.
- 2.6.1:
- Rotamer panel: the residue list appears immediately and computes hydrogen-bond and clash counts in the background, replacing a wait measured at over ten seconds. Columns are sortable, and the counts are now correct.
- Compressed file loading: support for .gz and .maegz files.
- Water hydrogen bonds: a crystallographic water deposited without explicit hydrogens now accepts hydrogen bonds, including from protein donors, filling in solvent networks around a site. H2O and D2O are recognized as solvent.
- Ligand alignment: a substitution or bond-order change no longer collapses the alignment onto a partial scaffold, and poses are ranked by matched atoms, then element agreement, then RMSD.
- Report a Problem: send a bug report from the right sidebar without leaving your session. Each report carries a screenshot of your view, your account details, your workspace and scene names and contents. Disabled for on-prem deployments.
- Image capture up to 8192 px on the long edge on desktop and in the web viewer, double the previous limit.
- Selection filters: filters built from an atom selection group by residue, chain, and model, and a sequence-menu selection now resolves to the highest-occupancy alternate location.
- Cross-entry export filters: one filter can span multiple entries, so a single rule applies across the whole workspace in one export.
- Scene recording countdown: the framing brackets follow your view while the timer runs, then anchor in world space at zero, so the shot holds that framing while you look around freely.
- Clearer chemistry errors: minimization and formal-charge failures report the underlying reason instead of failing silently, and one error no longer disables minimization for the session.
- Level of detail while editing: editable models now participate in the level-of-detail budget introduced in 2.6.0, instead of only consuming it.
- Web viewer: component selection can be driven fr

New Features and Improvements
- Scene Recording & Playback: record scenes (including their annotations) and play them back, including on the web viewer.
- Residue Editor: one built-in tool for both residue mutations and rotamer (side-chain) edits, with improved handling of alternate locations.
- MARA Tools: run MARA cheminformatics tools on a whole entry, a component, or your current selection right from the in-headset sidebar (VR + desktop); results and any molecular outputs come back as new structures without changing what you sent.
- Rich Annotations: add custom text and sound annotations, with URLs supported inside text; annotations carry through scene duplication and playback.
- Ligand Table View Presets: save and switch ligand-table layouts per Project, filter by numeric rating, and toggle a 3D tag per ligand.
- Shared Selection: opt-in sharing of your selection with collaborators in your avatar color; following a user now shows their selection too.
- XR Keyboard v2: real-time dictation and clipboard support in the in-headset keyboard.
- Interactions: halogen-π interactions, ligand↔protein-only filtering, highlighting that networks across users, and show/hide toggles for pinned interaction labels.
- Multi-model & trajectory: load multi-model MAE files, atom-count-aware frame limits, smoother large-trajectory playback, and per-frame surfaces when stepping through frames.
- More new tools: Export to SMILES, TM-align protein–protein alignment, "Set as ligand" designation, direct distance filters, a redesigned color picker, chain-instance coloring, an in-app server switch (private cloud / on-prem), and a Loading Report that flags and auto-resolves fixable load issues.
- Pointer highlight: flash a highlight around your pointer that broadcasts to collaborators so they can see where you're pointing.
- Web App: sequence menu, multi-protein structure alignment, image export, scene-playback controls, .pdbqt loading, touch input for tablets and phones, Org role management, and structures now render visible on load. Viewers can step through models and make selections.

Optimizations and Fixes
- Rebuilt real-time collaboration networking: replaced Photon with a custom in-house networking stack for more reliable multi-user sessions. Foundational and invisible by design, it underpins all live collaboration going forward.
- Large workspaces: level-of-detail rendering, a dynamic-resolution spatial grid, and faster large-molecule loading, with rendering improvements for Quest and Android.
- Surfaces: surface and ESP computation now runs asynchronously in the background so it no longer stalls the session, plus a faster surface protocol and correct surfaces for disconnected atoms (waters, ions).
- Networking efficiency: more efficient payload compression for large structures.
- Network health: live high-ping indicators and better connection-loss recovery in both XR and web.
- Performance safeguards: the load manager that hides very heavy structures to protect framerate now correctly counts passthrough and editable-model rendering against its budget.
- Loading: cancellable structure loading with a progress bar, and a fix for loads that stalled on unknown workspaces.
- Stability: eliminated multiple API and main-thread freezes (selection builder, menu scroll, workspace change) and cleaned up connection, token, and inter-entry handling.
- Web App reliability: fixed the ~30-second disconnect/rejoin loop that occurred while a tab was backgrounded.
- 60+ additional fixes across freezes, UI polish, workspace management, and rendering, plus a higher scene limit (now 50 per workspace) and faster, more accurate ring detection.

New Features and Improvements
- 2.5.0:
- Torsion Angle Tool — interactively rotate dihedral angles with real-time strain coloring (green→yellow→red gradient)
- Trajectory Playback — load and scrub molecular dynamics frame-by-frame, synced across users (2,000 frame limit)
- Web ↔ XR Collaboration — web and Quest users now share the same live session with cursors, voice, and real-time sync
- Projects & Permissions — project-based workspace organization with owner/editor/viewer access and public sharing
- Interaction Analysis — visualize, annotate, and report on chemical interactions with hover highlighting
- New File Formats — load MAE, PSE/MOE, PQR as entries into existing workspaces, plus improved PDB parsing
- Electrostatic Surface Potential (ESP) Maps — custom color ramps with adjustable scales, synced across users
- User Focus Mode — highlight and focus on specific users or components with persistent visual emphasis
- Scene Management — save/restore point-of-view per scene, apply transforms across scenes, recenter view
- MARA Workspace Viewer redesign with chat, pinned messages, user follow, and avatar support
- Public workspaces with anonymous access — no login required to view shared workspaces
- 2.5.1:
- WebGL instanced atomistic rendering — Large structures and 20,000+ atom MD trajectories now play back in real time on WebGL with dramatically reduced memory use.
- Skybox selection — A new settings dropdown lets users pick VR background environments and toggle ground plane visibility.
- Stepper controls — Distance Filter and Electrostatic Ramp panels replace sliders with numeric input + hold-to-repeat steppers for precise XR adjustment.

Optimizations and Fixes
- 2.5.0:
- Persistent surface caching (including WebGL) — surfaces load instantly on revisit instead of recomputing
- 30+ bug fixes across rendering, controllers, workspace management, tools, and networking
- Fixed surface computation lag and concurrent execution issues
- Fixed workspace loading freeze, unexpected movement, and synchronization issues
- Improved PDB atom element detection and nucleic acid support for ribbon selection
- 2.5.1:
- Torsion haptics — VR controllers now vibrate as the torsion angle changes for a more tactile sense of conformational adjustment.
- Torsion menu cleanup — Empty structures are now hidden from the torsion tool menu.
- Torsion performance — Significant performance improvements during active torsion editing.
- Trajectory stability — Optimized trajectory network usage.
- Frame navigation tooltips — Previous/Next Frame buttons now show tooltips in the trajectory panel.
- Structure group auto-expand/collapse — Groups now expand when shown and collapse when hidden, matching the web UI.
- Project permission label — Project permission level is now shown as a label, and the options menu is disabled for non-editable roles.
- Camera follow pitch offset — Following another user now correctly accounts for pitch offset.
- WebGL memory — Increased RAM allocation for the WebGL client to support larger sessions.
- Recenter Self countdown — Improved sound and increased volume for better feedback.

New Features and Improvements
- Added Passthrough Mixed Reality support for the Meta Quest 2 and Meta Quest Pro devices via the wrist menu
- Added support for Meta Avatars which enable avatar customization on Meta devices and presets for Non-meta devices enhancing social presence
- Added support for the Meta Quest Pro Device
- Changed the Locomotion mechanism to a discrete state now activated through the “Edit Position” button on the wrist menu
- Added a Content Discovery Menu to replace Advanced Tutorials
- Added the time to the wrist menu and removed the wrist watch
- Added the X button to be a hotkey for mute/unmute the microphone
- Added transition states (fade to black) during loading states for a smoother user experience
- License locked Atom Labels
- License locked Surfaces
- License Locked Spatial Playback functionality (Rewind, Fast-forward, and interact)
- License locked the Duplicate Molecule feature
- Removed the “Open All” button from the wrist menu
- Adjusted all menus sizes to be smaller for Mixed Reality
- Added ability to have guests steal presenter by grabbing an unlocked molecule
- Added a “Internet Connection is lost” prompt in the lobby when disconnected from internet
- Hide avatars for when a user is too close to another user
- Changed notifications prompt to spawn in front of the user
- Added a prompt for adding Microphone Permissions to the Nanome App when first launching
- Removed “Teleport Out” from the Action menu
- Changed the Wrist Menu design
- Moved the Spatial Recording button in the wrist menu into the Room button on the Wrist menu
- Combined the View Presenter Requests and Request Presenter Button in the wrist menu
- Added Parental Control lock for the web browser accessible via https://home.nanome.ai
- Removed automatic user teleportation from the Spatial Recordings
- Removed automatic face-center of room when teleporting tiles via locomotion
- Added a specific Alphafold Coloring Schema
- Added a toggle between desktop and mobile view for the in-VR Web Browser
- Added a quick-save button on the wrist menu
- Added ability to anchor a workspace to a physical room via Spatial Anchors
- Added the ability to bring your desk into XR and snap the whiteboard to it
- Changing the Complex name now emits a complexUpdate event to the Plugin System
- Disabled Merging two proteins
- Increased the accuracy of the Device Limiter
- Adjusted Wrist menu location due to new avatars
- Updated Quick tool switch interaction to ignore trigger action
- Added a notification if a user tries to search from the load menu without any text
- Inverted the Fo-Fc Colors for Electron Density Maps to be more scientifically accurate
- Added new substructure ID Filters
- Added a voice indicator and mute button to the Lobby’s avatar preview mirror
- Added a cancel button to the Load Menu
- Added the option to Combine molecules with and without chain renaming
- Enabled rendering backsidee of surfaces for PCVR
- SDF v2000 parsing captures formal charges
- Hydrogens computation now stores formal charges on all involved atoms
- Removed disabled Change Avatar button from Avatar Menu when inside a room
- Default disabled automatic height adjustment for users in Mixed Reality
- Added Auto-join and Auto Idle Rejoin
- Supporting Self-hosted Quickdrop for Enterprise
- Added Presentation Setup Options to config and Action Menu. The presenter can choose to have these options trigger when guests join the room: Position all guests to presenter’s current position, Hide only guests, Hide all users

Optimizations and Fixes
- Patched Unity security vulnerability that was present in the current Unity Project Version. Updated to the safe version, 6000.0.58f2.
- Fixed bug where complex markers appeared offset to the complex
- Fixed Vive Cosmos Support
- Fixed inconsistent Grid Lock default behavior
- Fixed time warps occurring on undo/redo
- Fixed bugs when entering and exiting a scene
- Adjusted text and spacing for residue and atom count since it wa