CLC Main Workbench: baixar versions anteriors

Improvements
- Automatic opening of a browser when following a web link from the Workbench, including when using QDI online licensing, is supported for more Linux desktops.
- Various minor improvements
Bug fixes
- Fixed an issue causing EMBL formatted nucleotide sequences containing two or more different symbols apart from AGCTN to be imported as peptide sequences in earlier versions in the 26 release line.
- Fixed an issue affecting the ability to mark sequences in alignments or sequence lists in earlier versions in the 26 release line. In affected versions, marking was treated as synonymous with the selection of all the residues in a sequence. This affected the actions that could be taken on marked sequences, and had the effect that, after checking selection boxes to mark sequences, a click elsewhere in the graphical view or in a linked table view, would clear the marked status of all other sequences, and would mark the sequence clicked on. In addressing this issue, a number of changes have been introduced. These are listed in the Changes section of the release notes.
- The flashing effect observed when the mouse cursor was moved across selected regions of sequences has been removed. This affected earlier versions in the 26 release line, and could be observed in elements such as alignments and sequence lists.
- Fixed an issue affecting alignments in earlier releases in the 26 release line, where a region of an individual sequence could be deleted from the view opened using the right-click option in the Table view, "Open This Sequence".
- Various minor bugfixes
- Vulnerabilities fixed in this release include:
- CVE-2026-49844
- CVE-2026-59903
Changes
- The bundled Java version is Java 21.0.12.1, where we use the JRE from the Azul OpenJDK builds.
- When working in the graphical view of an alignment or sequence list:
- Marking sequences can be done by clicking once on a sequence name, and unmarked by clicking again on the sequence name. This correspondingly selects the selection boxes that can be displayed by checking the "Show selection boxes" option in the Side Panel.
- The names of marked sequences are highlighted.
- The "Delete Marked Sequences" option, removed in earlier versions in the 26 release line, has been re-introduced in the context menu opened with a right-click on a sequence label or sequence content.
- When working with linked graphical and table views of a sequence list or alignment, selecting a row in the table view selects all the residues in the corresponding sequence in the graphical view. It does not affect the marked status.
Advanced notice
- The legacy Workbench policy property 'run_on_workbench_when_server_is_available' will not be supported from version 27.0. The workbench_save_to_server policy property, available since version 25.0, should be used instead.
- Installers for Intel macs will no longer be provided from June, 2027.

QIAGEN CLC Main Workbench 26.0.5
Bug fixes
- Fixed an issue where double-clicking an annotation in the circular view of a sequence selected all symbols instead of just those overlapping the annotation.
- Fixed an issue causing workflows to look pixelated in the Workflow Editor canvas and the Minimap in the Side Panel when using a scaled monitor (e.g. an HiDPI monitor).
- Fixed an issue where QDI Licensing could not be used if the Workbench was configured to use a proxy that requires authentication.
- Vulnerabilities fixed in this release include:
- CVE-2026-9828
- CVE-2026-54512
- CVE-2026-54513
- CVE-2026-54514
- CVE-2026-54515
- CVE-2026-47244
- CVE-2026-44249
- CVE-2026-45416
- CVE-2026-48043
- CVE-2026-50020
- CVE-2026-50560
- CVE-2026-50010
- CVE-2026-56745
- CVE-2026-56746
- CVE-2026-56819
- CVE-2026-55831
- CVE-2026-55833
- CVE-2026-59898
- CVE-2026-59899
- CVE-2026-59900
- CVE-2026-59901
- CVE-2026-59921
- CVE-2026-59949
Changes
The bundled Java version is Java 21.0.12, where we use the JRE from the Azul OpenJDK builds.
Advanced notice
The legacy Workbench policy property 'run_on_workbench_when_server_is_available' will not be supported from version 27.0. The workbench_save_to_server policy property, available since version 25.0, should be used instead.

Bug fixes
- Fixed an issue where mouse-based range selection did not work in the cloning editor.
Changes
The bundled Java version is Java 21.0.10, where we use the JRE from the Azul OpenJDK builds.
Advanced notice
- The legacy Workbench policy property 'run_on_workbench_when_server_is_available' will not be supported from version 27.0. The workbench_save_to_server policy property, available since version 25.0, should be used instead.

QIAGEN CLC Main Workbench
Improvements
- Exporting PDFs of reports that contain plots with many points is faster than previously.
- Various minor improvements
Bug fixes
- Fixed an issue in Create Sequence Constructs where, when a saved Sequence List was used as input and at least three sequences in that list were deselected, roughly half of the deselected sequences would be included in the construct set generated.
- Fixed an issue causing the "Pairwise % identity" value in the Positional stats palette in the Side Panel of alignments to be incorrectly calculated.
- Fixes relating to history information in results of workflow analyses:
- Fixed an issue affecting the history information in outputs generated using installed workflows that contained at least one Fork element with all its output channels connected to downstream steps, where the workflow version was reported as 0.0 and no build-id was included.
- Fixed an issue affecting the history of workflow log elements generated by running a workflow on a CLC Workbench, where the details of the workflow run (name, version, and where relevant, build id) were not present. This problem did not affect log elements generated by analyses run on a CLC Server or on the cloud.
- The following fixes affecting history information in outputs generated by workflows run on the cloud:
- Details of the workflow run (name, version, and where relevant, build id) were not present in the history of Workflow Result Metadata elements.
- History information in outputs generated using installed workflows did not contain the correct workflow build-id.
- History information in outputs from workflows launched from the workflow editor contained a workflow build-id when there should not have been one.
- Various minor bug fixes
- CVEs fixed in this release include:
- CVE-2025-67735
- CVE-2025-12183
- CVE-2025-66566

Bug fixes
- Fixed an issue causing labels for annotations on sequences displayed in "No wrap" mode to not be visible unless the start of the annotation was in view when using a HiDPI or other scaled monitor.
- CVEs fixed in this release include:
- - CVE-2025-31257
- CVE-2025-53066
- CVE-2025-53057
- CVE-2025-61748
Changes
The bundled Java version is Java 21.0.9, where we use the JRE from the Azul OpenJDK builds.
Please see the release notes for CLC Main Workbench 26.0, below, for a full list of changes since the last general release of this software.

Improvements
- The ClusteredNR peptide database is available to search using BLAST at NCBI.
- Various minor improvements
Bug fixes
CVEs fixed in this release include:
- CVE-2025-30749
- CVE-2025-50106
- CVE-2025-24855
- CVE-2025-27113
- CVE-2025-30754
- CVE-2025-50059
- CVE-2025-30761
- CVE-2025-48924
- CVE-2025-49128
- CVE-2025-52999
- CVE-2025-25193
- CVE-2025-24970
Reference data related
- Effective July 16, 2025, Download Pfam Database downloaded Pfam 37.4. That update affected downloads using this version and earlier versions of the software.
Advanced notice
- The policy property ‘run_on_workbench_when_server_is_available’ will be retired in a future release. Please use the workbench_save_to_server policy instead.

Improvements
- Positions in reads that do not match the reference in read mappings are displayed using the defined mismatch colors at all zoom levels, rather than just when zoomed in.
- Data downloaded from an AWS S3 bucket via a CLC Server AWS Connection using the "Download and Save..." option in the Remote Files tab can be downloaded to a CLC Server location or to disk (a CLC Server import/export directory). Previously such downloads could only be saved to a CLC Server location.
- Using the right-click "Upload to This Folder" menu option in the Remote Files tab, data for upload to AWS S3 buckets can be selected from CLC data locations and the local file system. When logged into a CLC Server with one or more valid AWS Connections, data for upload can also be selected from CLC Server locations, and, when an AWS Connection configured on the CLC Server is selected, data can also be uploaded from CLC Server import/export directories. Previously data could only be selected from CLC data locations.
- Improvements made to better support licensing handling for CLC Workbenches run on hardened Linux environment where execution in TEMP is not allowed.
- Various minor improvements
Bug fixes
- Fixed an issue where BLAST at NCBI could fail if the 'Mask low complexity regions' option was unchecked.
- The background color of the 3D Molecule Viewer can again be specified in the Side Panel settings when working with a Molecule Project. This setting was absent in CLC Genomics Workbench 25.0 and 25.0.1.
- Fixed a bug where table rows removed from a selection could be silently added back into the selected set if the table was subsequently sorted based on column values.
- Fixed an issue affecting the second or subsequent use of Associate Data Automatically when associating data with rows of a CLC Metadata Table using the Prefix or Suffix matching scheme. If no changes were made when launching Associate Data Automatically the second or subsequent time in a given Workbench session, the "Exact" scheme was used instead of the selected scheme. The first use of this functionality was unaffected by this problem.
- Various minor bugfixes
- CVEs fixed in this release include:
- CVE-2025-21502
- CVE-2024-21208
- CVE-2024-21210
- CVE-2024-21217
- CVE-2025-21587
- CVE-2025-30698
- CVE-2025-30691
- CVE-2024-47606
- CVE-2024-54534
- CVE-2025-3167
- CVE-2024-12798
- CVE-2024-12801
- CVE-2025-46701
Reference data related
Effective June 18, 2025, Download Pfam Database downloads Pfam 37.3. This update affects downloads using this version and earlier versions of the CLC Main Workbench.